Plant Antimicrobial Peptides: State of the Art, In Silico Prediction and Perspectives in the Omics Era.
Identifieur interne : 000015 ( Main/Exploration ); précédent : 000014; suivant : 000016Plant Antimicrobial Peptides: State of the Art, In Silico Prediction and Perspectives in the Omics Era.
Auteurs : Carlos André Dos Santos-Silva [Brésil] ; Luisa Zupin [Italie] ; Marx Oliveira-Lima [Brésil] ; Lívia Maria Batista Vilela [Brésil] ; João Pacifico Bezerra-Neto [Brésil] ; José Ribamar Ferreira-Neto [Brésil] ; José Diogo Cavalcanti Ferreira [Brésil] ; Roberta Lane De Oliveira-Silva [Brésil] ; Carolline De Jesús Pires [Brésil] ; Flavia Figueira Aburjaile [Brésil] ; Marianne Firmino De Oliveira [Brésil] ; Ederson Akio Kido [Brésil] ; Sergio Crovella [Italie] ; Ana Maria Benko-Iseppon [Brésil]Source :
- Bioinformatics and biology insights [ 1177-9322 ] ; 2020.
Abstract
Even before the perception or interaction with pathogens, plants rely on constitutively guardian molecules, often specific to tissue or stage, with further expression after contact with the pathogen. These guardians include small molecules as antimicrobial peptides (AMPs), generally cysteine-rich, functioning to prevent pathogen establishment. Some of these AMPs are shared among eukaryotes (eg, defensins and cyclotides), others are plant specific (eg, snakins), while some are specific to certain plant families (such as heveins). When compared with other organisms, plants tend to present a higher amount of AMP isoforms due to gene duplications or polyploidy, an occurrence possibly also associated with the sessile habit of plants, which prevents them from evading biotic and environmental stresses. Therefore, plants arise as a rich resource for new AMPs. As these molecules are difficult to retrieve from databases using simple sequence alignments, a description of their characteristics and in silico (bioinformatics) approaches used to retrieve them is provided, considering resources and databases available. The possibilities and applications based on tools versus database approaches are considerable and have been so far underestimated.
DOI: 10.1177/1177932220952739
PubMed: 32952397
PubMed Central: PMC7476358
Affiliations:
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Maternal and Child Health-IRCCS, Burlo Garofolo, Trieste, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Genetic Immunology laboratory, Institute for Maternal and Child Health-IRCCS, Burlo Garofolo, Trieste</wicri:regionArea><wicri:noRegion>Trieste</wicri:noRegion></affiliation></author><author><name sortKey="Oliveira Lima, Marx" sort="Oliveira Lima, Marx" uniqKey="Oliveira Lima M" first="Marx" last="Oliveira-Lima">Marx Oliveira-Lima</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author><author><name sortKey="Vilela, Livia Maria Batista" sort="Vilela, Livia Maria Batista" uniqKey="Vilela L" first="Lívia Maria Batista" last="Vilela">Lívia Maria Batista Vilela</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author><author><name sortKey="Bezerra Neto, Joao Pacifico" sort="Bezerra Neto, Joao Pacifico" uniqKey="Bezerra Neto J" first="João Pacifico" last="Bezerra-Neto">João Pacifico Bezerra-Neto</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author><author><name sortKey="Ferreira Neto, Jose Ribamar" sort="Ferreira Neto, Jose Ribamar" uniqKey="Ferreira Neto J" first="José Ribamar" last="Ferreira-Neto">José Ribamar Ferreira-Neto</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author><author><name sortKey="Ferreira, Jose Diogo Cavalcanti" sort="Ferreira, Jose Diogo Cavalcanti" uniqKey="Ferreira J" first="José Diogo Cavalcanti" last="Ferreira">José Diogo Cavalcanti Ferreira</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Instituto Federal de Pernambuco, Pesqueira, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Instituto Federal de Pernambuco, Pesqueira</wicri:regionArea><wicri:noRegion>Pesqueira</wicri:noRegion></affiliation></author><author><name sortKey="De Oliveira Silva, Roberta Lane" sort="De Oliveira Silva, Roberta Lane" uniqKey="De Oliveira Silva R" first="Roberta Lane" last="De Oliveira-Silva">Roberta Lane De Oliveira-Silva</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author><author><name sortKey="Pires, Carolline De Jesus" sort="Pires, Carolline De Jesus" uniqKey="Pires C" first="Carolline De Jesús" last="Pires">Carolline De Jesús Pires</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author><author><name sortKey="Aburjaile, Flavia Figueira" sort="Aburjaile, Flavia Figueira" uniqKey="Aburjaile F" first="Flavia Figueira" last="Aburjaile">Flavia Figueira Aburjaile</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author><author><name sortKey="De Oliveira, Marianne Firmino" sort="De Oliveira, Marianne Firmino" uniqKey="De Oliveira M" first="Marianne Firmino" last="De Oliveira">Marianne Firmino De Oliveira</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author><author><name sortKey="Kido, Ederson Akio" sort="Kido, Ederson Akio" uniqKey="Kido E" first="Ederson Akio" last="Kido">Ederson Akio Kido</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author><author><name sortKey="Crovella, Sergio" sort="Crovella, Sergio" uniqKey="Crovella S" first="Sergio" last="Crovella">Sergio Crovella</name><affiliation wicri:level="1"><nlm:affiliation>Genetic Immunology laboratory, Institute for Maternal and Child Health-IRCCS, Burlo Garofolo, Trieste, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Genetic Immunology laboratory, Institute for Maternal and Child Health-IRCCS, Burlo Garofolo, Trieste</wicri:regionArea><wicri:noRegion>Trieste</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Medicine, Surgery and Health Sciences, University of Trieste, Trieste, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Medicine, Surgery and Health Sciences, University of Trieste, Trieste</wicri:regionArea><wicri:noRegion>Trieste</wicri:noRegion></affiliation></author><author><name sortKey="Benko Iseppon, Ana Maria" sort="Benko Iseppon, Ana Maria" uniqKey="Benko Iseppon A" first="Ana Maria" last="Benko-Iseppon">Ana Maria Benko-Iseppon</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Genética, Universidade Federal de Pernambuco, Recife</wicri:regionArea><wicri:noRegion>Recife</wicri:noRegion></affiliation></author></analytic><series><title level="j">Bioinformatics and biology insights</title><idno type="ISSN">1177-9322</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Even before the perception or interaction with pathogens, plants rely on constitutively guardian molecules, often specific to tissue or stage, with further expression after contact with the pathogen. These guardians include small molecules as antimicrobial peptides (AMPs), generally cysteine-rich, functioning to prevent pathogen establishment. Some of these AMPs are shared among eukaryotes (eg, defensins and cyclotides), others are plant specific (eg, snakins), while some are specific to certain plant families (such as heveins). When compared with other organisms, plants tend to present a higher amount of AMP isoforms due to gene duplications or polyploidy, an occurrence possibly also associated with the sessile habit of plants, which prevents them from evading biotic and environmental stresses. Therefore, plants arise as a rich resource for new AMPs. As these molecules are difficult to retrieve from databases using simple sequence alignments, a description of their characteristics and in silico (bioinformatics) approaches used to retrieve them is provided, considering resources and databases available. The possibilities and applications based on tools versus database approaches are considerable and have been so far underestimated.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">32952397</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>28</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1177-9322</ISSN><JournalIssue CitedMedium="Print"><Volume>14</Volume><PubDate><Year>2020</Year></PubDate></JournalIssue><Title>Bioinformatics and biology insights</Title><ISOAbbreviation>Bioinform Biol Insights</ISOAbbreviation></Journal><ArticleTitle>Plant Antimicrobial Peptides: State of the Art, In Silico Prediction and Perspectives in the Omics Era.</ArticleTitle><Pagination><MedlinePgn>1177932220952739</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1177/1177932220952739</ELocationID><Abstract><AbstractText>Even before the perception or interaction with pathogens, plants rely on constitutively guardian molecules, often specific to tissue or stage, with further expression after contact with the pathogen. These guardians include small molecules as antimicrobial peptides (AMPs), generally cysteine-rich, functioning to prevent pathogen establishment. Some of these AMPs are shared among eukaryotes (eg, defensins and cyclotides), others are plant specific (eg, snakins), while some are specific to certain plant families (such as heveins). When compared with other organisms, plants tend to present a higher amount of AMP isoforms due to gene duplications or polyploidy, an occurrence possibly also associated with the sessile habit of plants, which prevents them from evading biotic and environmental stresses. Therefore, plants arise as a rich resource for new AMPs. As these molecules are difficult to retrieve from databases using simple sequence alignments, a description of their characteristics and in silico (bioinformatics) approaches used to retrieve them is provided, considering resources and databases available. The possibilities and applications based on tools versus database approaches are considerable and have been so far underestimated.</AbstractText><CopyrightInformation>© The Author(s) 2020.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Dos Santos-Silva</LastName><ForeName>Carlos André</ForeName><Initials>CA</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zupin</LastName><ForeName>Luisa</ForeName><Initials>L</Initials><Identifier Source="ORCID">https://orcid.org/0000-0001-5886-9129</Identifier><AffiliationInfo><Affiliation>Genetic Immunology laboratory, Institute for Maternal and Child Health-IRCCS, Burlo Garofolo, Trieste, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Oliveira-Lima</LastName><ForeName>Marx</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Vilela</LastName><ForeName>Lívia Maria Batista</ForeName><Initials>LMB</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bezerra-Neto</LastName><ForeName>João Pacifico</ForeName><Initials>JP</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ferreira-Neto</LastName><ForeName>José Ribamar</ForeName><Initials>JR</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ferreira</LastName><ForeName>José Diogo Cavalcanti</ForeName><Initials>JDC</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Departamento de Genética, Instituto Federal de Pernambuco, Pesqueira, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>de Oliveira-Silva</LastName><ForeName>Roberta Lane</ForeName><Initials>RL</Initials><Identifier Source="ORCID">https://orcid.org/0000-0003-1876-0094</Identifier><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pires</LastName><ForeName>Carolline de Jesús</ForeName><Initials>CJ</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Aburjaile</LastName><ForeName>Flavia Figueira</ForeName><Initials>FF</Initials><Identifier Source="ORCID">https://orcid.org/0000-0002-1067-1882</Identifier><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>de Oliveira</LastName><ForeName>Marianne Firmino</ForeName><Initials>MF</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kido</LastName><ForeName>Ederson Akio</ForeName><Initials>EA</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Crovella</LastName><ForeName>Sergio</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Genetic Immunology laboratory, Institute for Maternal and Child Health-IRCCS, Burlo Garofolo, Trieste, Italy.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Medicine, Surgery and Health Sciences, University of Trieste, Trieste, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Benko-Iseppon</LastName><ForeName>Ana Maria</ForeName><Initials>AM</Initials><AffiliationInfo><Affiliation>Departamento de Genética, Universidade Federal de Pernambuco, Recife, Brazil.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D016454">Review</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>09</Month><Day>02</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Bioinform Biol Insights</MedlineTA><NlmUniqueID>101467187</NlmUniqueID><ISSNLinking>1177-9322</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Defensin</Keyword><Keyword MajorTopicYN="N">cyclotide</Keyword><Keyword MajorTopicYN="N">hevein</Keyword><Keyword MajorTopicYN="N">impatiens-like</Keyword><Keyword MajorTopicYN="N">knotin</Keyword><Keyword MajorTopicYN="N">lipid transfer protein</Keyword><Keyword MajorTopicYN="N">macadamia β-barrelins</Keyword><Keyword MajorTopicYN="N">puroindoline</Keyword><Keyword MajorTopicYN="N">snakin</Keyword><Keyword MajorTopicYN="N">thaumatin</Keyword></KeywordList><CoiStatement>Declaration of conflicting interests:The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.</CoiStatement></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2020</Year><Month>07</Month><Day>14</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2020</Year><Month>07</Month><Day>30</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>9</Month><Day>21</Day><Hour>6</Hour><Minute>5</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>9</Month><Day>22</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>9</Month><Day>22</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">32952397</ArticleId><ArticleId IdType="doi">10.1177/1177932220952739</ArticleId><ArticleId IdType="pii">10.1177_1177932220952739</ArticleId><ArticleId IdType="pmc">PMC7476358</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>J Mol Biol. 1995 Apr 7;247(4):536-40</Citation><ArticleIdList><ArticleId IdType="pubmed">7723011</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Microbiol. 2016 Apr 08;7:470</Citation><ArticleIdList><ArticleId IdType="pubmed">27092125</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1999 Oct 29;293(3):629-38</Citation><ArticleIdList><ArticleId IdType="pubmed">10543955</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2004 Jan 1;32(Database issue):D590-2</Citation><ArticleIdList><ArticleId IdType="pubmed">14681488</ArticleId></ArticleIdList></Reference><Reference><Citation>Br J Clin Pharmacol. 2017 Jan;83(1):63-70</Citation><ArticleIdList><ArticleId IdType="pubmed">26987851</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Protein Pept Sci. 2017;18(4):368-374</Citation><ArticleIdList><ArticleId IdType="pubmed">27323806</ArticleId></ArticleIdList></Reference><Reference><Citation>J Plant Physiol. 2007 Mar;164(3):238-52</Citation><ArticleIdList><ArticleId IdType="pubmed">16542753</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013 Nov 11;8(11):e79728</Citation><ArticleIdList><ArticleId IdType="pubmed">24244550</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 1997 Sep 26;272(39):24480-7</Citation><ArticleIdList><ArticleId IdType="pubmed">9305910</ArticleId></ArticleIdList></Reference><Reference><Citation>J Comput Chem. 2005 Dec;26(16):1668-88</Citation><ArticleIdList><ArticleId IdType="pubmed">16200636</ArticleId></ArticleIdList></Reference><Reference><Citation>Molecules. 2014 Aug 14;19(8):12280-303</Citation><ArticleIdList><ArticleId IdType="pubmed">25153857</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 1999 Aug;19(4):473-80</Citation><ArticleIdList><ArticleId IdType="pubmed">10504569</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2018 Mar 8;172(6):1228-1238</Citation><ArticleIdList><ArticleId IdType="pubmed">29522744</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2018 May 22;115(21):E4758-E4766</Citation><ArticleIdList><ArticleId IdType="pubmed">29735687</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Comput Biol. 2014 Apr 10;10(4):e1003571</Citation><ArticleIdList><ArticleId IdType="pubmed">24722481</ArticleId></ArticleIdList></Reference><Reference><Citation>J Chem Theory Comput. 2008 Mar;4(3):435-47</Citation><ArticleIdList><ArticleId IdType="pubmed">26620784</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Struct Biol. 1996 Aug;3(8):662-5</Citation><ArticleIdList><ArticleId IdType="pubmed">8756320</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochim Biophys Acta Gen Subj. 2019 Jun;1863(6):1158-1166</Citation><ArticleIdList><ArticleId IdType="pubmed">30986507</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2010 May 28;328(5982):1168-72</Citation><ArticleIdList><ArticleId IdType="pubmed">20508130</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1999 Dec 17;294(5):1327-36</Citation><ArticleIdList><ArticleId IdType="pubmed">10600388</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 1992 Aug 5;267(22):15301-9</Citation><ArticleIdList><ArticleId IdType="pubmed">1639777</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Plant Physiol Plant Mol Biol. 1996 Jun;47:627-654</Citation><ArticleIdList><ArticleId IdType="pubmed">15012303</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 2011 Jul 15;286(28):25145-53</Citation><ArticleIdList><ArticleId IdType="pubmed">21561864</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2008 Feb;66(3):205-19</Citation><ArticleIdList><ArticleId IdType="pubmed">18049798</ArticleId></ArticleIdList></Reference><Reference><Citation>J Antimicrob Chemother. 2010 Sep;65(9):1964-71</Citation><ArticleIdList><ArticleId IdType="pubmed">20558471</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell Mol Life Sci. 2006 Jun;63(12):1370-85</Citation><ArticleIdList><ArticleId IdType="pubmed">16715411</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem J. 2007 May 1;403(3):583-91</Citation><ArticleIdList><ArticleId IdType="pubmed">17269932</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 2012 Aug 3;287(32):27001-6</Citation><ArticleIdList><ArticleId IdType="pubmed">22700984</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2016 Aug;67(16):4791-5</Citation><ArticleIdList><ArticleId IdType="pubmed">27521600</ArticleId></ArticleIdList></Reference><Reference><Citation>Peptides. 2005 Jul;26(7):1113-9</Citation><ArticleIdList><ArticleId IdType="pubmed">15949628</ArticleId></ArticleIdList></Reference><Reference><Citation>ACS Chem Biol. 2011 Apr 15;6(4):345-55</Citation><ArticleIdList><ArticleId IdType="pubmed">21194241</ArticleId></ArticleIdList></Reference><Reference><Citation>Folia Microbiol (Praha). 2014 May;59(3):181-96</Citation><ArticleIdList><ArticleId IdType="pubmed">24092498</ArticleId></ArticleIdList></Reference><Reference><Citation>F1000Res. 2020 Jun 9;9:576</Citation><ArticleIdList><ArticleId IdType="pubmed">32802318</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2010 Jan;152(1):356-65</Citation><ArticleIdList><ArticleId IdType="pubmed">19926801</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2007 Jan;35(Database issue):D265-8</Citation><ArticleIdList><ArticleId IdType="pubmed">17090586</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol Biochem. 2013 Sep;70:318-24</Citation><ArticleIdList><ArticleId IdType="pubmed">23811120</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Biophys Biomol Struct. 2000;29:291-325</Citation><ArticleIdList><ArticleId IdType="pubmed">10940251</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Protein Pept Sci. 2010 May;11(3):181-8</Citation><ArticleIdList><ArticleId IdType="pubmed">20088772</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 1989 Sep 8;245(4922):1100-2</Citation><ArticleIdList><ArticleId IdType="pubmed">17838811</ArticleId></ArticleIdList></Reference><Reference><Citation>Biopolymers. 1995 Dec;36(6):751-63</Citation><ArticleIdList><ArticleId IdType="pubmed">8555422</ArticleId></ArticleIdList></Reference><Reference><Citation>Eur J Biochem. 1990 Dec 12;194(2):533-9</Citation><ArticleIdList><ArticleId IdType="pubmed">2176600</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS Lett. 1990 Sep 17;270(1-2):191-4</Citation><ArticleIdList><ArticleId IdType="pubmed">2226781</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2015 Mar;167(3):1158-85</Citation><ArticleIdList><ArticleId IdType="pubmed">25596183</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Protein Pept Sci. 2004 Oct;5(5):341-349</Citation><ArticleIdList><ArticleId IdType="pubmed">15551519</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2016 Sep;84 Suppl 1:76-86</Citation><ArticleIdList><ArticleId IdType="pubmed">26370505</ArticleId></ArticleIdList></Reference><Reference><Citation>Future Med Chem. 2012 Aug;4(12):1619-44</Citation><ArticleIdList><ArticleId IdType="pubmed">22917249</ArticleId></ArticleIdList></Reference><Reference><Citation>Electrophoresis. 1999 Dec;20(18):3551-67</Citation><ArticleIdList><ArticleId IdType="pubmed">10612281</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS Lett. 2001 Jan 19;488(3):145-8</Citation><ArticleIdList><ArticleId IdType="pubmed">11163761</ArticleId></ArticleIdList></Reference><Reference><Citation>J Enzyme Inhib Med Chem. 2009 Jun;24(3):646-54</Citation><ArticleIdList><ArticleId IdType="pubmed">18951281</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell Rep. 2010 May;29(5):419-36</Citation><ArticleIdList><ArticleId IdType="pubmed">20204373</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2013 Apr 1;29(7):845-54</Citation><ArticleIdList><ArticleId IdType="pubmed">23407358</ArticleId></ArticleIdList></Reference><Reference><Citation>J Med Chem. 2006 Oct 19;49(21):6177-96</Citation><ArticleIdList><ArticleId IdType="pubmed">17034125</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 1999 Jun;11(6):1093-104</Citation><ArticleIdList><ArticleId IdType="pubmed">10368180</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2006 Oct 1;65(1):15-26</Citation><ArticleIdList><ArticleId IdType="pubmed">16862531</ArticleId></ArticleIdList></Reference><Reference><Citation>Allergy. 2004 May;59(5):479-81</Citation><ArticleIdList><ArticleId IdType="pubmed">15080826</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2013 Sep 24;110(39):15680-5</Citation><ArticleIdList><ArticleId IdType="pubmed">24014592</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Med Chem. 2013;20(18):2296-314</Citation><ArticleIdList><ArticleId IdType="pubmed">23531220</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochim Biophys Acta. 1998 Jan 15;1382(1):80-90</Citation><ArticleIdList><ArticleId IdType="pubmed">9507071</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1997 Apr 4;267(3):727-48</Citation><ArticleIdList><ArticleId IdType="pubmed">9126849</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Commun. 2018 Apr 16;9(1):1490</Citation><ArticleIdList><ArticleId IdType="pubmed">29662055</ArticleId></ArticleIdList></Reference><Reference><Citation>Peptides. 2014 Jun;56:30-44</Citation><ArticleIdList><ArticleId IdType="pubmed">24681437</ArticleId></ArticleIdList></Reference><Reference><Citation>Eur J Biochem. 1994 Dec 1;226(2):413-22</Citation><ArticleIdList><ArticleId IdType="pubmed">8001559</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell Rep. 2005 Aug;24(6):366-73</Citation><ArticleIdList><ArticleId IdType="pubmed">15789205</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biochem. 1999 Jan;125(1):1-8</Citation><ArticleIdList><ArticleId IdType="pubmed">9880788</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Top Med Chem. 2015;16(2):206-19</Citation><ArticleIdList><ArticleId IdType="pubmed">26126908</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Lett. 2014 Aug;357(1):63-8</Citation><ArticleIdList><ArticleId IdType="pubmed">24888447</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2010 Jun 02;5(6):e10926</Citation><ArticleIdList><ArticleId IdType="pubmed">20532195</ArticleId></ArticleIdList></Reference><Reference><Citation>Acta Pharm Sin B. 2014 Aug;4(4):258-65</Citation><ArticleIdList><ArticleId IdType="pubmed">26579393</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Plant Sci. 2003 Jun;8(6):247-50</Citation><ArticleIdList><ArticleId IdType="pubmed">12818656</ArticleId></ArticleIdList></Reference><Reference><Citation>Biophys Rev. 2017 Apr;9(2):91-102</Citation><ArticleIdList><ArticleId IdType="pubmed">28510083</ArticleId></ArticleIdList></Reference><Reference><Citation>Oral Oncol. 2020 Sep;108:104821</Citation><ArticleIdList><ArticleId IdType="pubmed">32474389</ArticleId></ArticleIdList></Reference><Reference><Citation>Biophys J. 2003 Apr;84(4):2416-26</Citation><ArticleIdList><ArticleId IdType="pubmed">12668449</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochemistry. 1991 Dec 10;30(49):11600-8</Citation><ArticleIdList><ArticleId IdType="pubmed">1660724</ArticleId></ArticleIdList></Reference><Reference><Citation>J Chromatogr B Analyt Technol Biomed Life Sci. 2003 Aug 25;794(1):109-14</Citation><ArticleIdList><ArticleId IdType="pubmed">12888203</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2016 Aug;67(16):4801-12</Citation><ArticleIdList><ArticleId IdType="pubmed">27222514</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochemistry. 2010 Apr 13;49(14):2987-98</Citation><ArticleIdList><ArticleId IdType="pubmed">20235548</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS Lett. 2004 Aug 13;572(1-3):3-7</Citation><ArticleIdList><ArticleId IdType="pubmed">15304314</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Cancer Ther. 2002 Apr;1(6):365-9</Citation><ArticleIdList><ArticleId IdType="pubmed">12477048</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biomol Struct Dyn. 2020 May 6;:1-10</Citation><ArticleIdList><ArticleId IdType="pubmed">32306822</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2018 Mar;86 Suppl 1:387-398</Citation><ArticleIdList><ArticleId IdType="pubmed">29178137</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem Soc Trans. 2002 Nov;30(Pt 6):935-40</Citation><ArticleIdList><ArticleId IdType="pubmed">12440950</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Signal Behav. 2008 Dec;3(12):1091-2</Citation><ArticleIdList><ArticleId IdType="pubmed">19704502</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Bioinformatics. 2015 Jul 05;16:210</Citation><ArticleIdList><ArticleId IdType="pubmed">26142484</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Bioinformatics. 2008 Jan 23;9:40</Citation><ArticleIdList><ArticleId IdType="pubmed">18215316</ArticleId></ArticleIdList></Reference><Reference><Citation>Biotechnol Adv. 2017 May - Jun;35(3):337-349</Citation><ArticleIdList><ArticleId IdType="pubmed">28216008</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Plant Biol. 2010 Jun 22;10:122</Citation><ArticleIdList><ArticleId IdType="pubmed">20565992</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 2014 Dec 12;289(50):34953-64</Citation><ArticleIdList><ArticleId IdType="pubmed">25342741</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 1994 Apr;25(1):43-57</Citation><ArticleIdList><ArticleId IdType="pubmed">7516201</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Med. 2018 Jun 4;16(1):78</Citation><ArticleIdList><ArticleId IdType="pubmed">29860943</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Plant Biol. 2019 Jan 7;19(1):8</Citation><ArticleIdList><ArticleId IdType="pubmed">30616545</ArticleId></ArticleIdList></Reference><Reference><Citation>J Allergy Clin Immunol. 2004 May;113(5):821-30; quiz 831</Citation><ArticleIdList><ArticleId IdType="pubmed">15131562</ArticleId></ArticleIdList></Reference><Reference><Citation>J Comput Chem. 2005 Dec;26(16):1781-802</Citation><ArticleIdList><ArticleId IdType="pubmed">16222654</ArticleId></ArticleIdList></Reference><Reference><Citation>Neuron. 2018 Sep 19;99(6):1129-1143</Citation><ArticleIdList><ArticleId IdType="pubmed">30236283</ArticleId></ArticleIdList></Reference><Reference><Citation>Genet Mol Biol. 2012 Jun;35(1 (suppl)):283-91</Citation><ArticleIdList><ArticleId IdType="pubmed">22802713</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Phys. 2010 Oct 1;6(10):751-758</Citation><ArticleIdList><ArticleId IdType="pubmed">21297873</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochemistry. 1992 May 5;31(17):4308-14</Citation><ArticleIdList><ArticleId IdType="pubmed">1567877</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2016 Jan 4;44(D1):D1087-93</Citation><ArticleIdList><ArticleId IdType="pubmed">26602694</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochemistry (Mosc). 2017 Dec;82(13):1659-1674</Citation><ArticleIdList><ArticleId IdType="pubmed">29523064</ArticleId></ArticleIdList></Reference><Reference><Citation>Molecules. 2015 Aug 14;20(8):14889-901</Citation><ArticleIdList><ArticleId IdType="pubmed">26287145</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochemistry. 1998 Jan 27;37(4):983-90</Citation><ArticleIdList><ArticleId IdType="pubmed">9454588</ArticleId></ArticleIdList></Reference><Reference><Citation>J Leukoc Biol. 2004 Jan;75(1):39-48</Citation><ArticleIdList><ArticleId IdType="pubmed">12960280</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Plant. 2011 Nov;4(6):947-64</Citation><ArticleIdList><ArticleId IdType="pubmed">21486996</ArticleId></ArticleIdList></Reference><Reference><Citation>Biotechnol Genet Eng Rev. 1996;13:19-50</Citation><ArticleIdList><ArticleId IdType="pubmed">8948108</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2002 Mar-Apr;48(5-6):633-47</Citation><ArticleIdList><ArticleId IdType="pubmed">11999840</ArticleId></ArticleIdList></Reference><Reference><Citation>Toxicon. 2010 Jul;55(8):1491-509</Citation><ArticleIdList><ArticleId IdType="pubmed">20211197</ArticleId></ArticleIdList></Reference><Reference><Citation>Biotechnol Genet Eng Rev. 2003;20:277-90</Citation><ArticleIdList><ArticleId IdType="pubmed">14997856</ArticleId></ArticleIdList></Reference><Reference><Citation>Int J Biochem Cell Biol. 2005 Nov;37(11):2239-53</Citation><ArticleIdList><ArticleId IdType="pubmed">16084753</ArticleId></ArticleIdList></Reference><Reference><Citation>Peptides. 2009 Dec;30(12):2144-9</Citation><ArticleIdList><ArticleId IdType="pubmed">19778562</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell Physiol. 2007 Mar;48(3):471-83</Citation><ArticleIdList><ArticleId IdType="pubmed">17284469</ArticleId></ArticleIdList></Reference><Reference><Citation>Dev Comp Immunol. 2008;32(3):286-98</Citation><ArticleIdList><ArticleId IdType="pubmed">17658598</ArticleId></ArticleIdList></Reference><Reference><Citation>J Chromatogr B Analyt Technol Biomed Life Sci. 2002 May 5;771(1-2):33-48</Citation><ArticleIdList><ArticleId IdType="pubmed">12015991</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2013 Dec;81(12):2082-95</Citation><ArticleIdList><ArticleId IdType="pubmed">24115211</ArticleId></ArticleIdList></Reference><Reference><Citation>Chembiochem. 2015 May 4;16(7):1068-77</Citation><ArticleIdList><ArticleId IdType="pubmed">25821084</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochemistry (Mosc). 2015 Mar;80(3):332-42</Citation><ArticleIdList><ArticleId IdType="pubmed">25761687</ArticleId></ArticleIdList></Reference><Reference><Citation>Expert Rev Proteomics. 2004 Jun;1(1):37-46</Citation><ArticleIdList><ArticleId IdType="pubmed">15966797</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS J. 2006 Aug;273(15):3489-97</Citation><ArticleIdList><ArticleId IdType="pubmed">16824043</ArticleId></ArticleIdList></Reference><Reference><Citation>Food Chem. 2013 Dec 1;141(3):2967-73</Citation><ArticleIdList><ArticleId IdType="pubmed">23871047</ArticleId></ArticleIdList></Reference><Reference><Citation>Lloydia. 1973 Jun;36(2):207-8</Citation><ArticleIdList><ArticleId IdType="pubmed">4744557</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2006 Jan 1;34(Database issue):D192-4</Citation><ArticleIdList><ArticleId IdType="pubmed">16381843</ArticleId></ArticleIdList></Reference><Reference><Citation>Expert Opin Investig Drugs. 2007 May;16(5):595-604</Citation><ArticleIdList><ArticleId IdType="pubmed">17461734</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteomics. 2002 Oct;2(10):1406-12</Citation><ArticleIdList><ArticleId IdType="pubmed">12422357</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2017 Dec 18;8:2058</Citation><ArticleIdList><ArticleId IdType="pubmed">29326730</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol Biochem. 2009 Jan;47(1):73-9</Citation><ArticleIdList><ArticleId IdType="pubmed">19010689</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Opin Struct Biol. 2013 Dec;23(6):894-902</Citation><ArticleIdList><ArticleId IdType="pubmed">24138780</ArticleId></ArticleIdList></Reference><Reference><Citation>Biophys Rev. 2018 Apr;10(2):375-389</Citation><ArticleIdList><ArticleId IdType="pubmed">29546562</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS Lett. 2003 Feb 11;536(1-3):215-9</Citation><ArticleIdList><ArticleId IdType="pubmed">12586366</ArticleId></ArticleIdList></Reference><Reference><Citation>Chem Biol Drug Des. 2013 Jan;81(1):50-60</Citation><ArticleIdList><ArticleId IdType="pubmed">23066895</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2020 Feb 10;10(1):2194</Citation><ArticleIdList><ArticleId IdType="pubmed">32042035</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Pharm Biotechnol. 2004 Feb;5(1):79-88</Citation><ArticleIdList><ArticleId IdType="pubmed">14965211</ArticleId></ArticleIdList></Reference><Reference><Citation>Protein Pept Lett. 2012 Nov;19(11):1194-204</Citation><ArticleIdList><ArticleId IdType="pubmed">22587787</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Struct Biol. 1996 Jan;3(1):19-23</Citation><ArticleIdList><ArticleId IdType="pubmed">8548448</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Methods. 2007 Oct;4(10):787-97</Citation><ArticleIdList><ArticleId IdType="pubmed">17901868</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2006 Jun;141(2):793-801</Citation><ArticleIdList><ArticleId IdType="pubmed">16648221</ArticleId></ArticleIdList></Reference><Reference><Citation>J Nat Prod. 1998 Jan 23;61(1):77-81</Citation><ArticleIdList><ArticleId IdType="pubmed">9548831</ArticleId></ArticleIdList></Reference><Reference><Citation>J Pept Sci. 2017 Jan;23(1):4-12</Citation><ArticleIdList><ArticleId IdType="pubmed">27966278</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 2016 Feb 22;428(4):720-725</Citation><ArticleIdList><ArticleId IdType="pubmed">26410586</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2018 Apr;556(7700):235-238</Citation><ArticleIdList><ArticleId IdType="pubmed">29618812</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Struct Biol. 2002 Sep;9(9):646-52</Citation><ArticleIdList><ArticleId IdType="pubmed">12198485</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem Biophys Res Commun. 2008 Oct 17;375(2):230-4</Citation><ArticleIdList><ArticleId IdType="pubmed">18700134</ArticleId></ArticleIdList></Reference><Reference><Citation>Biotechnol Adv. 2007 Mar-Apr;25(2):195-7</Citation><ArticleIdList><ArticleId IdType="pubmed">17196784</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2011 Mar;75(4-5):497-513</Citation><ArticleIdList><ArticleId IdType="pubmed">21298396</ArticleId></ArticleIdList></Reference><Reference><Citation>J Proteome Res. 2008 Oct;7(10):4598-602</Citation><ArticleIdList><ArticleId IdType="pubmed">18774840</ArticleId></ArticleIdList></Reference><Reference><Citation>Biophys J. 2003 Aug;85(2):1145-64</Citation><ArticleIdList><ArticleId IdType="pubmed">12885659</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochim Biophys Acta Biomembr. 2018 Feb;1860(2):617-623</Citation><ArticleIdList><ArticleId IdType="pubmed">29106975</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2014 Jan;84(1-2):189-202</Citation><ArticleIdList><ArticleId IdType="pubmed">24081691</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2009 Jan;37(Database issue):D963-8</Citation><ArticleIdList><ArticleId IdType="pubmed">18836196</ArticleId></ArticleIdList></Reference><Reference><Citation>Chem Soc Rev. 2009 Dec;38(12):3289-300</Citation><ArticleIdList><ArticleId IdType="pubmed">20449049</ArticleId></ArticleIdList></Reference><Reference><Citation>Acta Crystallogr D Biol Crystallogr. 1995 Sep 1;51(Pt 5):663-81</Citation><ArticleIdList><ArticleId IdType="pubmed">15299796</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2016 Nov;244(5):971-997</Citation><ArticleIdList><ArticleId IdType="pubmed">27562524</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochimie. 2015 Sep;116:125-32</Citation><ArticleIdList><ArticleId IdType="pubmed">26196691</ArticleId></ArticleIdList></Reference><Reference><Citation>IEEE Trans Neural Netw. 2010 Jul;21(7):1048-59</Citation><ArticleIdList><ArticleId IdType="pubmed">20550990</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol Biochem. 2019 Jul;140:55-67</Citation><ArticleIdList><ArticleId IdType="pubmed">31082659</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2004 Jan 1;32(Database issue):D115-9</Citation><ArticleIdList><ArticleId IdType="pubmed">14681372</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 1998 Dec;118(4):1431-8</Citation><ArticleIdList><ArticleId IdType="pubmed">9847118</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 1991 Jan;183(2):258-64</Citation><ArticleIdList><ArticleId IdType="pubmed">24193629</ArticleId></ArticleIdList></Reference><Reference><Citation>J Proteome Res. 2010 May 7;9(5):2051-61</Citation><ArticleIdList><ArticleId IdType="pubmed">20377245</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 2012 Dec 21;287(52):43884-98</Citation><ArticleIdList><ArticleId IdType="pubmed">23129773</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2002 Mar;53(368):429-37</Citation><ArticleIdList><ArticleId IdType="pubmed">11847241</ArticleId></ArticleIdList></Reference><Reference><Citation>Methods Mol Biol. 2019;1888:127-139</Citation><ArticleIdList><ArticleId IdType="pubmed">30519944</ArticleId></ArticleIdList></Reference><Reference><Citation>Chem Biol. 2000 Jul;7(7):529-43</Citation><ArticleIdList><ArticleId IdType="pubmed">10903932</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2007 Jul;35(Web Server issue):W407-10</Citation><ArticleIdList><ArticleId IdType="pubmed">17517781</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2016 Jun 30;82(14):4288-4298</Citation><ArticleIdList><ArticleId IdType="pubmed">27208129</ArticleId></ArticleIdList></Reference><Reference><Citation>3 Biotech. 2019 May;9(5):192</Citation><ArticleIdList><ArticleId IdType="pubmed">31065492</ArticleId></ArticleIdList></Reference><Reference><Citation>Brief Bioinform. 2015 Nov;16(6):1045-56</Citation><ArticleIdList><ArticleId IdType="pubmed">25900849</ArticleId></ArticleIdList></Reference><Reference><Citation>Int J Mol Sci. 2019 Apr 11;20(7):</Citation><ArticleIdList><ArticleId IdType="pubmed">30978907</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2010 Jan;38(Database issue):D774-80</Citation><ArticleIdList><ArticleId IdType="pubmed">19923233</ArticleId></ArticleIdList></Reference><Reference><Citation>J Plant Res. 2004 Apr;117(2):155-62</Citation><ArticleIdList><ArticleId IdType="pubmed">15108035</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Comput Biol. 2008 Feb;4(2):e12</Citation><ArticleIdList><ArticleId IdType="pubmed">18463710</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2013 Apr 05;4:75</Citation><ArticleIdList><ArticleId IdType="pubmed">23577016</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2018 Jun 13;8(1):9049</Citation><ArticleIdList><ArticleId IdType="pubmed">29899538</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2016 Nov 03;7:1639</Citation><ArticleIdList><ArticleId IdType="pubmed">27857717</ArticleId></ArticleIdList></Reference><Reference><Citation>Methods Enzymol. 1990;183:63-98</Citation><ArticleIdList><ArticleId IdType="pubmed">2156132</ArticleId></ArticleIdList></Reference><Reference><Citation>Eur J Med Chem. 2014 Apr 22;77:248-57</Citation><ArticleIdList><ArticleId IdType="pubmed">24650712</ArticleId></ArticleIdList></Reference><Reference><Citation>Algorithms Mol Biol. 2011 Oct 27;6(1):25</Citation><ArticleIdList><ArticleId IdType="pubmed">22032267</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2015 Aug;27(8):2095-118</Citation><ArticleIdList><ArticleId IdType="pubmed">26276833</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochimie. 2006 Jan;88(1):45-52</Citation><ArticleIdList><ArticleId IdType="pubmed">16085352</ArticleId></ArticleIdList></Reference><Reference><Citation>Angew Chem Int Ed Engl. 2016 Jul 4;55(28):7930-3</Citation><ArticleIdList><ArticleId IdType="pubmed">27145301</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochimie. 2017 Apr;135:15-27</Citation><ArticleIdList><ArticleId IdType="pubmed">28038935</ArticleId></ArticleIdList></Reference><Reference><Citation>J Agric Food Chem. 2010 May 26;58(10):6490-7</Citation><ArticleIdList><ArticleId IdType="pubmed">20429585</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS J. 2011 Nov;278(22):4304-22</Citation><ArticleIdList><ArticleId IdType="pubmed">21917115</ArticleId></ArticleIdList></Reference><Reference><Citation>J Proteome Res. 2007 Aug;6(8):3143-51</Citation><ArticleIdList><ArticleId IdType="pubmed">17579388</ArticleId></ArticleIdList></Reference><Reference><Citation>Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Feb 1;61(Pt 2):186-8</Citation><ArticleIdList><ArticleId IdType="pubmed">16510989</ArticleId></ArticleIdList></Reference><Reference><Citation>Genes Genet Syst. 2006 Jun;81(3):171-80</Citation><ArticleIdList><ArticleId IdType="pubmed">16905871</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2014 Jul;42(Web Server issue):W252-8</Citation><ArticleIdList><ArticleId IdType="pubmed">24782522</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem J. 2012 Aug 15;446(1):69-77</Citation><ArticleIdList><ArticleId IdType="pubmed">22612157</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biochem. 1982 Jan;91(1):257-63</Citation><ArticleIdList><ArticleId IdType="pubmed">7068562</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Microbiol. 2005 Mar;3(3):238-50</Citation><ArticleIdList><ArticleId IdType="pubmed">15703760</ArticleId></ArticleIdList></Reference><Reference><Citation>World J Microbiol Biotechnol. 2019 May 27;35(6):86</Citation><ArticleIdList><ArticleId IdType="pubmed">31134452</ArticleId></ArticleIdList></Reference><Reference><Citation>Brief Funct Genomic Proteomic. 2006 Dec;5(4):249-60</Citation><ArticleIdList><ArticleId IdType="pubmed">17124183</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2002 Aug 1;48(2):311-9</Citation><ArticleIdList><ArticleId IdType="pubmed">12112698</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2002 Nov;37(2):197-204</Citation><ArticleIdList><ArticleId IdType="pubmed">12409104</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 1998;14(9):755-63</Citation><ArticleIdList><ArticleId IdType="pubmed">9918945</ArticleId></ArticleIdList></Reference><Reference><Citation>Inflamm Bowel Dis. 2007 Oct;13(10):1284-92</Citation><ArticleIdList><ArticleId IdType="pubmed">17567878</ArticleId></ArticleIdList></Reference><Reference><Citation>Molecules. 2017 Apr 08;22(4):</Citation><ArticleIdList><ArticleId IdType="pubmed">28397764</ArticleId></ArticleIdList></Reference><Reference><Citation>Anal Bioanal Chem. 2012 Jul;403(9):2725-31</Citation><ArticleIdList><ArticleId IdType="pubmed">22569846</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Drug Targets. 2012 Aug;13(9):1148-57</Citation><ArticleIdList><ArticleId IdType="pubmed">22664076</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2009 Apr;69(6):745-59</Citation><ArticleIdList><ArticleId IdType="pubmed">19190987</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Genomics. 2009 Sep;10(6):402-15</Citation><ArticleIdList><ArticleId IdType="pubmed">20190955</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2001 May;67(5):2365-6</Citation><ArticleIdList><ArticleId IdType="pubmed">11319124</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2008 Nov 1;73(2):271-89</Citation><ArticleIdList><ArticleId IdType="pubmed">18655061</ArticleId></ArticleIdList></Reference><Reference><Citation>J Agric Food Chem. 2014 Jun 25;62(25):5734-42</Citation><ArticleIdList><ArticleId IdType="pubmed">24841122</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Opin Biotechnol. 2010 Apr;21(2):225-33</Citation><ArticleIdList><ArticleId IdType="pubmed">20197235</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 2012 Aug 3;287(32):27033-46</Citation><ArticleIdList><ArticleId IdType="pubmed">22700981</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1982 Sep 25;160(3):475-98</Citation><ArticleIdList><ArticleId IdType="pubmed">7154070</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Plant Microbe Interact. 1999 Jan;12(1):16-23</Citation><ArticleIdList><ArticleId IdType="pubmed">9885189</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2004 Jun 12;20(9):1466-7</Citation><ArticleIdList><ArticleId IdType="pubmed">14976030</ArticleId></ArticleIdList></Reference><Reference><Citation>Peptides. 2009 May;30(5):1007-20</Citation><ArticleIdList><ArticleId IdType="pubmed">19428780</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2018 Mar;86 Suppl 1:7-15</Citation><ArticleIdList><ArticleId IdType="pubmed">29082672</ArticleId></ArticleIdList></Reference><Reference><Citation>J Proteome Res. 2013 Nov 1;12(11):5146-59</Citation><ArticleIdList><ArticleId IdType="pubmed">23991906</ArticleId></ArticleIdList></Reference><Reference><Citation>Physiol Plant. 2014 Sep;152(1):32-42</Citation><ArticleIdList><ArticleId IdType="pubmed">24460633</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Protein Pept Sci. 2016 Jul 24;:</Citation><ArticleIdList><ArticleId IdType="pubmed">27455973</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Protein Pept Sci. 2010 May;11(3):199-209</Citation><ArticleIdList><ArticleId IdType="pubmed">20088767</ArticleId></ArticleIdList></Reference><Reference><Citation>Methods Mol Biol. 2010;604:105-21</Citation><ArticleIdList><ArticleId IdType="pubmed">20013367</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2017 Mar;85(3):359-377</Citation><ArticleIdList><ArticleId IdType="pubmed">27865038</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Protein Pept Sci. 2010 May;11(3):189-94</Citation><ArticleIdList><ArticleId IdType="pubmed">20353382</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS Lett. 1994 Aug 22;350(2-3):159-63</Citation><ArticleIdList><ArticleId IdType="pubmed">8070556</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteomics. 2002 Jan;2(1):36-47</Citation><ArticleIdList><ArticleId IdType="pubmed">11788990</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochim Biophys Acta. 2011 Nov;1808(11):2665-73</Citation><ArticleIdList><ArticleId IdType="pubmed">21787745</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 1993 Sep;103(1):221-6</Citation><ArticleIdList><ArticleId IdType="pubmed">8208848</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2016 Sep;84 Suppl 1:4-14</Citation><ArticleIdList><ArticleId IdType="pubmed">27171127</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochemistry. 1996 Oct 1;35(39):12712-22</Citation><ArticleIdList><ArticleId IdType="pubmed">8841115</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 1996 Mar 19;93(6):2598-602</Citation><ArticleIdList><ArticleId IdType="pubmed">8637920</ArticleId></ArticleIdList></Reference><Reference><Citation>J Comput Aided Mol Des. 2012 Jun;26(6):775-86</Citation><ArticleIdList><ArticleId IdType="pubmed">22566074</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2014 Jun 15;30(12):1771-3</Citation><ArticleIdList><ArticleId IdType="pubmed">24532726</ArticleId></ArticleIdList></Reference><Reference><Citation>Eur J Biochem. 1997 Mar 15;244(3):743-9</Citation><ArticleIdList><ArticleId IdType="pubmed">9108242</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 1995 Aug;108(4):1353-8</Citation><ArticleIdList><ArticleId IdType="pubmed">7659744</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2013 Dec;81(12):2150-8</Citation><ArticleIdList><ArticleId IdType="pubmed">24123156</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Cell Proteomics. 2018 Jul;17(7):1426-1431</Citation><ArticleIdList><ArticleId IdType="pubmed">29118029</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochemistry. 2005 Jan 25;44(3):851-60</Citation><ArticleIdList><ArticleId IdType="pubmed">15654741</ArticleId></ArticleIdList></Reference><Reference><Citation>Q Rev Biophys. 2003 Aug;36(3):307-40</Citation><ArticleIdList><ArticleId IdType="pubmed">15029827</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2016 Jan 4;44(D1):D1094-7</Citation><ArticleIdList><ArticleId IdType="pubmed">26467475</ArticleId></ArticleIdList></Reference><Reference><Citation>Molecules. 2016 Aug 13;21(8):</Citation><ArticleIdList><ArticleId IdType="pubmed">27529210</ArticleId></ArticleIdList></Reference><Reference><Citation>Physiol Mol Biol Plants. 2018 May;24(3):379-387</Citation><ArticleIdList><ArticleId IdType="pubmed">29692546</ArticleId></ArticleIdList></Reference><Reference><Citation>J Proteome Res. 2004 Sep-Oct;3(5):958-64</Citation><ArticleIdList><ArticleId IdType="pubmed">15473683</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2014 Jan;42(Database issue):D1154-8</Citation><ArticleIdList><ArticleId IdType="pubmed">24265220</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Immunol. 2020 Jan 31;11:93</Citation><ArticleIdList><ArticleId IdType="pubmed">32076420</ArticleId></ArticleIdList></Reference><Reference><Citation>Biomed Res Int. 2015;2015:475062</Citation><ArticleIdList><ArticleId IdType="pubmed">26000295</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Protoc. 2012 Jul 19;7(8):1511-22</Citation><ArticleIdList><ArticleId IdType="pubmed">22814390</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 1991 Jan 25;266(3):1564-73</Citation><ArticleIdList><ArticleId IdType="pubmed">1899089</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2019 Nov;250(5):1757-1772</Citation><ArticleIdList><ArticleId IdType="pubmed">31428874</ArticleId></ArticleIdList></Reference><Reference><Citation>J Comput Aided Mol Des. 2012 Jun;26(6):687-99</Citation><ArticleIdList><ArticleId IdType="pubmed">22569590</ArticleId></ArticleIdList></Reference><Reference><Citation>Biofouling. 2012;28(10):1033-61</Citation><ArticleIdList><ArticleId IdType="pubmed">23016989</ArticleId></ArticleIdList></Reference><Reference><Citation>Genomics Proteomics Bioinformatics. 2007 May;5(2):77-85</Citation><ArticleIdList><ArticleId IdType="pubmed">17893073</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Protein Pept Sci. 2020;21(1):36-51</Citation><ArticleIdList><ArticleId IdType="pubmed">30887921</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Pathog. 2014 Jul 31;10(7):e1004221</Citation><ArticleIdList><ArticleId IdType="pubmed">25079075</ArticleId></ArticleIdList></Reference><Reference><Citation>Biopolymers. 1998;47(6):479-91</Citation><ArticleIdList><ArticleId IdType="pubmed">10333739</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem Biophys Res Commun. 2014 Oct 17;453(2):254-67</Citation><ArticleIdList><ArticleId IdType="pubmed">24878531</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2002 Mar;128(3):951-61</Citation><ArticleIdList><ArticleId IdType="pubmed">11891250</ArticleId></ArticleIdList></Reference><Reference><Citation>Structure. 2013 Oct 8;21(10):1735-42</Citation><ArticleIdList><ArticleId IdType="pubmed">24035711</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2004 Jan 1;54(1):170-3</Citation><ArticleIdList><ArticleId IdType="pubmed">14705035</ArticleId></ArticleIdList></Reference><Reference><Citation>Pharmaceuticals (Basel). 2015 Nov 16;8(4):711-57</Citation><ArticleIdList><ArticleId IdType="pubmed">26580629</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 1987 Jun;171(2):241-6</Citation><ArticleIdList><ArticleId IdType="pubmed">24227332</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1990 Oct 5;215(3):403-10</Citation><ArticleIdList><ArticleId IdType="pubmed">2231712</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1992 Dec 5;228(3):893-908</Citation><ArticleIdList><ArticleId IdType="pubmed">1469722</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1999 Mar 5;286(4):1137-45</Citation><ArticleIdList><ArticleId IdType="pubmed">10047487</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2016 Apr 7;532(7597):64-8</Citation><ArticleIdList><ArticleId IdType="pubmed">27027296</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Microbiol. 2017 Oct 20;8:2051</Citation><ArticleIdList><ArticleId IdType="pubmed">29104569</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 1995 Nov;109(3):879-89</Citation><ArticleIdList><ArticleId IdType="pubmed">8552719</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2006 Jan;43(1):42-53</Citation><ArticleIdList><ArticleId IdType="pubmed">16376592</ArticleId></ArticleIdList></Reference><Reference><Citation>J Appl Microbiol. 2016 Oct;121(4):952-65</Citation><ArticleIdList><ArticleId IdType="pubmed">27280957</ArticleId></ArticleIdList></Reference><Reference><Citation>Semin Cell Dev Biol. 2019 Apr;88:107-118</Citation><ArticleIdList><ArticleId IdType="pubmed">29432955</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Immunol Med Microbiol. 2009 Jan;55(1):6-12</Citation><ArticleIdList><ArticleId IdType="pubmed">19077031</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2011 Aug 1;27(15):2076-82</Citation><ArticleIdList><ArticleId IdType="pubmed">21666270</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Biotechnol J. 2008 Feb;6(2):105-34</Citation><ArticleIdList><ArticleId IdType="pubmed">18069950</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2008 Jun 15;24(12):1421-5</Citation><ArticleIdList><ArticleId IdType="pubmed">18443017</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013 Jun 18;8(6):e66557</Citation><ArticleIdList><ArticleId IdType="pubmed">23825543</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2012 Aug;24(8):3198-217</Citation><ArticleIdList><ArticleId IdType="pubmed">22932676</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteins. 2008 Aug;72(2):547-56</Citation><ArticleIdList><ArticleId IdType="pubmed">18247410</ArticleId></ArticleIdList></Reference><Reference><Citation>Toxicol Appl Pharmacol. 1979 Mar 30;48(1 Pt 1):179-83</Citation><ArticleIdList><ArticleId IdType="pubmed">452040</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Biol. 2007 May 08;5:17</Citation><ArticleIdList><ArticleId IdType="pubmed">17488521</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1998 Sep 18;282(2):421-33</Citation><ArticleIdList><ArticleId IdType="pubmed">9735297</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 2011 Jul 8;286(27):24275-87</Citation><ArticleIdList><ArticleId IdType="pubmed">21596752</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Brésil</li><li>Italie</li></country></list><tree><country name="Brésil"><noRegion><name sortKey="Dos Santos Silva, Carlos Andre" sort="Dos Santos Silva, Carlos Andre" uniqKey="Dos Santos Silva C" first="Carlos André" last="Dos Santos-Silva">Carlos André Dos Santos-Silva</name></noRegion><name sortKey="Aburjaile, Flavia Figueira" sort="Aburjaile, Flavia Figueira" uniqKey="Aburjaile F" first="Flavia Figueira" last="Aburjaile">Flavia Figueira Aburjaile</name><name sortKey="Benko Iseppon, Ana Maria" sort="Benko Iseppon, Ana Maria" uniqKey="Benko Iseppon A" first="Ana Maria" last="Benko-Iseppon">Ana Maria Benko-Iseppon</name><name sortKey="Bezerra Neto, Joao Pacifico" sort="Bezerra Neto, Joao 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